From: Identification of genomic functional hotspots with copy number alteration in liver cancer
Chr | Start pos | End pos | Number of CNVs | Â | Presented gene set | Number gene sets |
---|---|---|---|---|---|---|
Gain | Â | Â | Â | Â | Â | Â |
 1 | 153.33 | 153.59 | 59 | bp | Response to lipopolysaccharide | 4 |
 1 | 153.27 | 153.43 | 59 | bp | Innate immune response | 4 |
 1 | 153.33 | 153.36 | 59 | bp | Response to zinc ion | 2 |
 1 | 152.27 | 153.43 | 59 | bp | Epidermis development | 13 |
 1 | 152.27 | 153.23 | 59 | mf | Structural molecule activity | 8 |
 1 | 152.88 | 153.43 | 58 | bp | Keratinocyte differentiation | 12 |
 1 | 152.88 | 153.23 | 58 | bp | Peptide cross-linking | 6 |
 1 | 152.88 | 153.23 | 58 | mf | Protein binding, bridging | 4 |
 1 | 153.50 | 153.60 | 57 | mf | Protein homodimerization activity | 5 |
 1 | 153.50 | 153.60 | 57 | cc | Perinuclear region of cytoplasm | 5 |
Loss | Â | Â | Â | Â | Â | Â |
 8 | 6.84 | 6.88 | 42 | bp | Response to virus | 3 |
 4 | 190.39 | 191.01 | 40 | mf | Sequence-specific DNA binding | 6 |
 4 | 190.39 | 191.01 | 40 | mf | Sequence-specific DNA binding transcription Factor activity | 6 |
 8 | 6.35 | 6.91 | 40 | cc | Extracellular space | 7 |
 4 | 90.80 | 91.76 | 40 | cc | Platelet alpha granule lumen | 2 |
 4 | 90.80 | 91.76 | 40 | bp | Platelet degranulation | 2 |
 8 | 26.61 | 27.47 | 39 | bp | Response to stress | 3 |
 17 | 10.35 | 10.56 | 38 | bp | Actin filament-based movement | 2 |
 8 | 26.37 | 27.31 | 37 | bp | Response to cocaine | 2 |
 8 | 22.88 | 23.08 | 37 | mf | Caspase activator activity | 2 |